STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAK48144.1Membrane protein-like protein. (349 aa)    
Predicted Functional Partners:
SAK91651.1
Scaffold protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
   
    0.677
pheT
phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.609
SAK59361.1
Antibiotic resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.609
SAK92372.1
Hypothetical protein.
  
     0.558
SAK48453.1
RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.530
SAK92257.1
Cupin domain protein.
  
     0.477
SAK82765.1
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
   
    0.450
SAK43593.1
Flagellar basal body rod protein FlgG.
    
   0.444
SAK48139.1
Membrane protein.
       0.441
Your Current Organism:
Caballeronia temeraria
NCBI taxonomy Id: 1777137
Other names: Burkholderia sp. LMG 29319, Burkholderia temeraria, Burkholderia temeraria Peeters et al. 2016, C. temeraria, CCUG 68410, Caballeronia temeraria (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29319, LMG:29319
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