STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_09502Krueppel-like factor 5. (744 aa)    
Predicted Functional Partners:
WN55_00629
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.759
WN55_09602
Uncharacterized protein.
    
 0.735
WN55_08760
Lysine-specific demethylase 6A.
    
 0.687
WN55_07807
Suppressor of fused like protein.
    
 0.687
WN55_07218
Chromodomain-helicase-DNA-binding protein Mi-2 like protein.
   
 0.675
WN55_03018
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.
    
  0.652
WN55_07771
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.651
WN55_06502
Ubiquitin-40S ribosomal protein S27a.
    
  0.644
WN55_01546
28S ribosomal protein S11, mitochondrial.
    
  0.641
WN55_07375
28S ribosomal protein S2, mitochondrial.
   
  0.638
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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