STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WN55_04764Serine/threonine-protein kinase atr; Belongs to the PI3/PI4-kinase family. (2332 aa)    
Predicted Functional Partners:
WN55_00141
Serine-protein kinase ATM; Belongs to the PI3/PI4-kinase family.
   
0.998
WN55_01936
Serine/threonine-protein kinase grp; Belongs to the GMC oxidoreductase family.
    
 0.993
WN55_07040
Putative cell division control protein 7 like protein 1.
    
 0.993
WN55_00425
Ovarian-specific serine/threonine-protein kinase Lok; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.992
WN55_07370
Tumor suppressor p53-binding protein 1.
    
 0.989
WN55_00867
DNA topoisomerase 2-binding protein 1-A.
    
 0.986
WN55_02307
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.986
WN55_01233
Double-strand break repair protein MRE11A; Belongs to the universal ribosomal protein uS11 family.
   
 0.983
WN55_05151
Breast cancer type 1 susceptibility protein like protein.
   
 0.983
WN55_02120
Clathrin interactor 1.
    
 0.978
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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