STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI67824.1Alpha/beta hydrolase family protein. (316 aa)    
Predicted Functional Partners:
nuoE
NADH-quinone oxidoreductase subunit E.
   
   0.954
CVI66990.1
Respiratory-chain NADH dehydrogenase, 30 Kd subunit.
   
 
 0.938
gltD_1
Glutamate synthase [NADPH] small chain.
  
 
 0.929
hndC
NADP-reducing hydrogenase subunit HndC.
   
 
 0.924
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.862
acpA
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.862
CVI68703.1
NADH dehydrogenase subunit I.
  
   0.801
hcnB_2
Hydrogen cyanide synthase subunit HcnB.
  
   0.800
CVI66514.1
Ferredoxin.
   
   0.798
ndhI
NAD(P)H-quinone oxidoreductase subunit I.
   
   0.798
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.