STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI74102.1Putative ABC transporter ATP-binding protein. (624 aa)    
Predicted Functional Partners:
artM_1
Arginine transport ATP-binding protein ArtM.
 
     
0.880
CVI74103.1
Putative multidrug export ATP-binding/permease protein.
 
    
0.835
CVI70370.1
Photosystem I assembly protein Ycf3.
   
  0.800
tcyC
L-cystine import ATP-binding protein TcyC.
 
     
0.799
potA_2
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
     
0.781
opuCA
Carnitine transport ATP-binding protein OpuCA.
 
     
0.726
artM_2
Arginine transport ATP-binding protein ArtM.
 
     
0.724
CVI74101.1
Cytidylate kinase.
       0.661
macB_1
Macrolide export ATP-binding/permease protein MacB.
 
     
0.632
yxdL
ABC transporter ATP-binding protein YxdL.
 
     
0.629
Your Current Organism:
Eubacteriaceae bacterium CHKCI004
NCBI taxonomy Id: 1780380
Other names: E. bacterium CHKCI004
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