STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07227.1Hypothetical protein; PFAM: Ureidoglycolate hydrolase; KEGG: npu:Npun_F1500 hypothetical protein; SPTR: Putative uncharacterized protein. (167 aa)    
Predicted Functional Partners:
AFZ07027.1
PFAM: Cupin domain; COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR013096; KEGG: ava:Ava_1579 TonB box-like; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2, barrel.
  
     0.753
AFZ09630.1
Tocopherol cyclase; KEGG: naz:Aazo_3505 hypothetical protein; SPTR: Tocopherol cyclase.
  
     0.696
AFZ07554.1
KEGG: ana:alr4045 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.694
AFZ04909.1
KEGG: cyj:Cyan7822_3250 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.680
AFZ05039.1
KEGG: ava:Ava_0863 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.674
AFZ04892.1
PFAM: Saccharopine dehydrogenase; COGs: COG1748 Saccharopine dehydrogenase and related protein; InterPro IPR005097; KEGG: ava:Ava_4394 saccharopine dehydrogenase; PFAM: Saccharopine dehydrogenase / Homospermidine synthase; SPTR: Saccharopine dehydrogenase.
  
     0.654
AFZ05344.1
Alpha/beta hydrolase fold protein; COGs: COG2267 Lysophospholipase; InterPro IPR000073; KEGG: ter:Tery_1807 alpha/beta hydrolase fold; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase fold.
  
     0.634
AFZ05786.1
FAD dependent oxidoreductase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR006076; KEGG: ter:Tery_0494 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Transposase.
  
     0.612
AFZ09536.1
InterPro IPR004365; KEGG: ter:Tery_4171 hypothetical protein; PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; SPTR: Putative uncharacterized protein.
  
     0.600
AFZ05160.1
GUN4 domain protein; PFAM: GUN4-like; InterPro IPR008629; KEGG: npu:Npun_F5475 GUN4 domain-containing protein; PFAM: GUN4-like; SPTR: Ycf53-like protein.
  
     0.596
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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