STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAG28731.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (396 aa)    
Predicted Functional Partners:
OAG28730.1
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.792
OAG27302.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.788
OAG28732.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.746
OAG28733.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.746
OAG27652.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.692
OAG28734.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.571
obg
GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
       0.539
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
       0.539
OAG27248.1
Pyruvate formate lyase-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.490
rex
Redox-sensing transcriptional repressor Rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
       0.433
Your Current Organism:
Thermodesulfatator autotrophicus
NCBI taxonomy Id: 1795632
Other names: DSM 101864, MCCC 1A01871, T. autotrophicus, Thermodesulfatator autotrophicus Lai et al. 2016, Thermodesulfatator sp. S606, strain S606
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