STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFZ75601.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (85 aa)    
Predicted Functional Partners:
OFZ75602.1
rRNA maturation RNase YbeY; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.762
OFZ75600.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.572
OFZ75599.1
dephospho-CoA kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.534
OFZ75608.1
Peptide chain release factor 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.458
OFZ75603.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.458
OFZ75609.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.437
Your Current Organism:
Bdellovibrionales bacterium RIFOXYD1FULL3984
NCBI taxonomy Id: 1797401
Other names: B. bacterium RIFOXYD1_FULL_39_84, Bdellovibrionales bacterium RIFOXYD1_FULL_39_84
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.