STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGA13786.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)    
Predicted Functional Partners:
OGA13093.1
Fumarate reductase (quinol) flavoprotein subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.897
OGA16576.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.897
OGA20167.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.895
OGA16616.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.895
OGA19864.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.894
OGA18701.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.893
OGA18460.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.893
OGA13799.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.672
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
    
 0.637
OGA16410.1
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.580
Your Current Organism:
Betaproteobacteria bacterium RIFCSPLOWO202FULL6319
NCBI taxonomy Id: 1797486
Other names: B. bacterium RIFCSPLOWO2_02_FULL_63_19, Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_63_19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.