STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGE70368.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (136 aa)    
Predicted Functional Partners:
OGE70157.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.999
OGE70179.1
SsrA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.999
OGE70203.1
50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.999
OGE70211.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.999
OGE70310.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
OGE70312.1
Elongation factor 4; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.999
OGE70327.1
Translation initiation factor IF-2; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.999
OGE70461.1
30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.999
A3B55_01430
DNA-directed RNA polymerase subunit beta; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
OGE70354.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
Your Current Organism:
Daviesbacteria bacterium RIFCSPLOWO201FULL4315
NCBI taxonomy Id: 1797790
Other names: C. Daviesbacteria bacterium RIFCSPLOWO2_01_FULL_43_15, Candidatus Daviesbacteria bacterium RIFCSPLOWO2_01_FULL_43_15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.