STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGQ46179.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (147 aa)    
Predicted Functional Partners:
A3H42_01490
Elongation factor 4; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
A3H42_02665
Restriction endonuclease; Too many ambiguous residues; incomplete; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.516
OGQ48538.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.426
Your Current Organism:
Deltaproteobacteria bacterium RIFCSPLOWO202FULL468
NCBI taxonomy Id: 1797879
Other names: D. bacterium RIFCSPLOWO2_02_FULL_46_8, Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_46_8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.