STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ28845.1Transposase. (440 aa)    
Predicted Functional Partners:
SDQ28912.1
DNA replication protein DnaC.
 
    0.929
SDQ14928.1
DNA replication protein DnaC.
  
    0.699
SDQ20573.1
DNA replication protein DnaC.
  
    0.699
SDQ32804.1
DNA replication protein DnaC.
  
    0.699
SDQ73251.1
DNA replication protein DnaC.
  
    0.699
SDR01004.1
DNA replication protein DnaC.
  
    0.699
SDR19297.1
DNA replication protein DnaC.
  
    0.699
SDR27398.1
DNA replication protein DnaC.
  
    0.699
SDR31078.1
DNA replication protein DnaC.
  
    0.699
SDR45345.1
DNA replication protein DnaC.
  
    0.699
Your Current Organism:
Pseudovibrio sp. TunPSC045I4
NCBI taxonomy Id: 1798213
Other names: P. sp. Tun.PSC04-5.I4, Pseudovibrio sp. Tun.PSC04-5.I4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.