STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR20828.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (281 aa)    
Predicted Functional Partners:
SDR20847.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.986
SDR20860.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.975
SDR20798.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  0.935
SDR47995.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.931
SDQ18445.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.922
SDR20812.1
Predicted dehydrogenase.
 
     0.914
SDQ73749.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.911
SDQ76497.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.907
SDQ97068.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.899
SDR13929.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.890
Your Current Organism:
Pseudovibrio sp. TunPSC045I4
NCBI taxonomy Id: 1798213
Other names: P. sp. Tun.PSC04-5.I4, Pseudovibrio sp. Tun.PSC04-5.I4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.