OGU17984.1 protein (Geobacteraceae bacterium GWC25311)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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Experiments

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Textmining

[Homology]

Score

OGU17984.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (567 aa)

Predicted Functional Partners:

OGU13108.1

0.997

OGU13413.1

0.997

A2076_03905

0.994

OGU16758.1

0.990

OGU13711.1

0.990

A2076_15085

0.990

OGU16705.1

0.989

OGU18305.1

0.989

OGU16843.1

0.988

OGU17347.1

0.988

Your Current Organism:

Geobacteraceae bacterium GWC25311

NCBI taxonomy Id: 1798316
Other names: G. bacterium GWC2_53_11, Geobacteraceae bacterium GWC2_53_11

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A2076_03905	A2076_15085	A2076_03905	A2076_15085	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.981
A2076_03905	OGU13108.1	A2076_03905	A2076_07475	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.999
A2076_03905	OGU13413.1	A2076_03905	A2076_17345	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.999
A2076_03905	OGU13711.1	A2076_03905	A2076_09810	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.998
A2076_03905	OGU16705.1	A2076_03905	A2076_06715	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.994
A2076_03905	OGU16758.1	A2076_03905	A2076_07015	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.998
A2076_03905	OGU16843.1	A2076_03905	A2076_00330	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.997
A2076_03905	OGU17347.1	A2076_03905	A2076_03855	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
A2076_03905	OGU17984.1	A2076_03905	A2076_14085	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.994
A2076_03905	OGU18305.1	A2076_03905	A2076_09210	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.998
A2076_15085	A2076_03905	A2076_15085	A2076_03905	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.981
A2076_15085	OGU13108.1	A2076_15085	A2076_07475	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.988
A2076_15085	OGU13413.1	A2076_15085	A2076_17345	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.986
A2076_15085	OGU13711.1	A2076_15085	A2076_09810	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.994
A2076_15085	OGU16705.1	A2076_15085	A2076_06715	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.987
A2076_15085	OGU16758.1	A2076_15085	A2076_07015	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.994
A2076_15085	OGU16843.1	A2076_15085	A2076_00330	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.985
A2076_15085	OGU17347.1	A2076_15085	A2076_03855	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
A2076_15085	OGU17984.1	A2076_15085	A2076_14085	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.990
A2076_15085	OGU18305.1	A2076_15085	A2076_09210	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.988