STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY75480.1Signal peptidase I; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (215 aa)    
Predicted Functional Partners:
OGY75908.1
DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.935
OGY75906.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
  0.933
OGY75675.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.903
OGY75672.1
V-type ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.861
OGY75678.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.813
OGY75674.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.804
OGY74466.1
ATP synthase F0 subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.695
OGY75677.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.695
A2240_03125
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.689
OGY75166.1
Elongation factor 4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.628
Your Current Organism:
Jacksonbacteria bacterium RIFOXYA2FULL4312
NCBI taxonomy Id: 1798462
Other names: C. Jacksonbacteria bacterium RIFOXYA2_FULL_43_12, Candidatus Jacksonbacteria bacterium RIFOXYA2_FULL_43_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.