STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGH20756.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)    
Predicted Functional Partners:
OGH20757.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.978
OGH20758.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.819
rtcB
RNA-splicing ligase RtcB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RtcB family.
  
    0.794
OGH20755.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.709
OGH20761.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.632
OGH20760.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.610
OGH20762.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.590
OGH20754.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.489
OGH20753.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.477
OGH20332.1
Hypothetical protein; Catalyzes the conversion of dihydroorotate to orotate.
    
  0.459
Your Current Organism:
Levybacteria bacterium RIFCSPHIGHO202FULL3713
NCBI taxonomy Id: 1798602
Other names: C. Levybacteria bacterium RIFCSPHIGHO2_02_FULL_37_13, Candidatus Levybacteria bacterium RIFCSPHIGHO2_02_FULL_37_13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.