STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZE42_07925Uncharacterized protein. (234 aa)    
Predicted Functional Partners:
AZE42_03986
Uncharacterized protein.
    
 0.924
SKI2
Cytoplasmic exosomal RNA helicase.
    
 0.781
AZE42_06132
CDC73_C domain-containing protein.
    
 0.761
AZE42_10503
Uncharacterized protein.
    
 0.753
AZE42_13613
TPR_REGION domain-containing protein.
    
 0.753
AZE42_03232
Uncharacterized protein.
   
 0.749
AZE42_02842
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.685
AZE42_09541
Uncharacterized protein.
    
 0.678
AZE42_03887
Uncharacterized protein.
    
 0.678
AZE42_05543
WD_REPEATS_REGION domain-containing protein.
  
 
  0.641
Your Current Organism:
Rhizopogon vesiculosus
NCBI taxonomy Id: 180088
Other names: R. vesiculosus
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