STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGW08246.1Riboflavin biosynthesis protein RibD; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)    
Predicted Functional Partners:
OGW08247.1
Riboflavin synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OGW08258.1
Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
OGW08248.1
6,7-dimethyl-8-ribityllumazine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
OGW09197.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.914
OGW08631.1
Riboflavin biosynthesis protein RibF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.913
OGW09206.1
Cyclic pyranopterin phosphate synthase MoaA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.903
OGW10799.1
Sodium:calcium symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.892
OGW09176.1
GTP cyclohydrolase I FolE; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.891
OGW10931.1
Molybdenum cofactor biosynthesis protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.869
OGW10663.1
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.841
Your Current Organism:
Nitrospinae bacterium RIFCSPLOWO2123915
NCBI taxonomy Id: 1801689
Other names: N. bacterium RIFCSPLOWO2_12_39_15, Nitrospinae bacterium RIFCSPLOWO2_12_39_15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.