STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGJ60102.1Cytidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)    
Predicted Functional Partners:
OGJ60103.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.837
OGJ60101.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   0.812
OGJ60100.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.770
OGJ60104.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.660
OGJ60099.1
CDP-paratose 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.539
OGJ60111.1
N-acetylneuraminate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.523
hisH
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
       0.510
OGJ60106.1
Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
       0.510
OGJ60113.1
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.496
OGJ60131.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.494
Your Current Organism:
Peribacteria bacterium RIFCSPHIGHO201FULL5513
NCBI taxonomy Id: 1801917
Other names: C. Peribacteria bacterium RIFCSPHIGHO2_01_FULL_55_13, Candidatus Peribacteria bacterium RIFCSPHIGHO2_01_FULL_55_13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.