STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIP13171.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)    
Predicted Functional Partners:
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
       0.760
OIP13168.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
OIP13170.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.757
OIP13167.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.566
OIP13166.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.538
OIP13172.1
Prepilin peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.535
OIP13165.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.496
OIP13173.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.492
OIP13164.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.401
Your Current Organism:
Caldisericum sp. CG2303611
NCBI taxonomy Id: 1805053
Other names: C. sp. CG2_30_36_11, Caldisericum sp. CG2_30_36_11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.