STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900086705_01547Unannotated protein. (153 aa)    
Predicted Functional Partners:
GCA_900086705_01605
Unannotated protein.
 
 
  0.927
GCA_900086705_00816
Unannotated protein.
    
 0.918
GCA_900086705_01546
Unannotated protein.
  
 
 0.895
GCA_900086705_01608
Unannotated protein.
 
 
  0.886
GCA_900086705_01548
Unannotated protein.
  
 
 0.876
GCA_900086705_01551
Unannotated protein.
  
 
 0.876
GCA_900086705_01920
Unannotated protein.
  
 
 0.862
GCA_900086705_01951
Unannotated protein.
  
 
 0.862
GCA_900086705_01550
Unannotated protein.
  
 
  0.856
GCA_900086705_01549
Unannotated protein.
  
 
  0.848
Your Current Organism:
Massilibacillus massiliensis
NCBI taxonomy Id: 1806837
Other names: CSUR P2411, Clostridiales bacterium Marseille-P2411, DSM 102838, M. massiliensis, strain Marseille-P2411
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.