STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQT74159.1Septum formation initiator; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)    
Predicted Functional Partners:
AQT74158.1
Septum formation initiator; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.944
AQT74157.1
Flp pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.899
AQT74160.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
0.899
AQT74161.1
Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.899
AQT74162.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.899
AQT74163.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.879
AQT74164.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.879
AQT76752.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.828
AQT74165.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.771
AQT76753.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.762
Your Current Organism:
Streptomyces sp. fd1xmd
NCBI taxonomy Id: 1812480
Other names: S. sp. fd1-xmd, Streptomyces sp. fd1-xmd
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.