STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC87520.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (409 aa)    
Predicted Functional Partners:
SDD10604.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.988
SDC87484.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.959
SDC87426.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  
  0.888
SDB98051.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.884
SDC82263.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.884
SDD41828.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.884
SDC87563.1
Transcriptional regulator, LacI family.
 
     0.821
SDC87601.1
Glycogen debranching enzyme (alpha-1,6-glucosidase).
 
     0.803
SDD00348.1
Glutamine synthetase.
    
   0.696
SDD13283.1
Glutamine synthetase.
    
   0.696
Your Current Organism:
Sanguibacter gelidistatuariae
NCBI taxonomy Id: 1814289
Other names: ATCC TSD-17, DSM 100501, JCM 30887, S. gelidistatuariae, Sanguibacter gelidistatuariae Pikuta et al. 2017, Sanguibacter sp. ISLP-3, Sanguibacteraceae bacterium ISLP-3, strain ISLP-3
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.