STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005014555Tetratricopeptide repeat domain 25. (490 aa)    
Predicted Functional Partners:
ENSSFAP00005018647
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.937
ENSSFAP00005007277
Coiled-coil domain containing 114.
   
 0.933
ENSSFAP00005052654
Armadillo repeat containing 4.
  
 0.880
ENSSFAP00005021425
annotation not available
   
 0.866
ENSSFAP00005021420
annotation not available
   
 0.837
ENSSFAP00005025759
Coiled-coil domain containing 151.
  
 0.817
ENSSFAP00005035447
annotation not available
  
 0.817
bag3
BCL2 associated athanogene 3.
    
 0.810
ENSSFAP00005037541
annotation not available
   
 0.793
ENSSFAP00005037547
annotation not available
   
 0.793
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.