STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
opn3Opsin 3. (389 aa)    
Predicted Functional Partners:
LOC115389250
Guanine nucleotide-binding protein G(t) subunit alpha-1.
    
 0.733
LOC115407640
Guanine nucleotide-binding protein G(t) subunit alpha-2-like.
    
 0.733
ENSSFAP00005035268
Guanine nucleotide binding protein (G protein), beta 5a.
    
  0.729
LOC115393915
Guanine nucleotide-binding protein subunit beta-5b-like.
    
  0.729
ENSSFAP00005006600
annotation not available
    
  0.720
LOC115387104
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13-like.
    
  0.720
gng10
G protein subunit gamma 10.
    
  0.720
gng8
G protein subunit gamma 8.
    
  0.712
LOC115409650
Guanine nucleotide-binding protein G(T) subunit gamma-T1-like.
    
  0.712
gng3
G protein subunit gamma 3.
    
  0.712
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.