STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c1ql3Complement C1q like 3. (256 aa)    
Predicted Functional Partners:
C1QC
Complement C1q subcomponent subunit C-like.
   
 
0.595
lig1
DNA ligase 1.
    
 0.593
ENSSFAP00005037541
annotation not available
    
  0.574
ENSSFAP00005037547
annotation not available
    
 0.574
ENSSFAP00005037550
annotation not available
    
  0.574
ENSSFAP00005005934
Integrin, beta 6.
    
 0.573
ENSSFAP00005037588
Integrin, beta 4.
    
 0.573
LOC115386523
Integrin alpha-3-like.
   
 0.555
LOC115393332
Integrin alpha-3-like.
   
 0.555
ENSSFAP00005002774
annotation not available
    
  0.551
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.