STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_004569Bms1-type G domain-containing protein. (649 aa)    
Predicted Functional Partners:
CVT24_008350
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.999
CVT24_009785
Uncharacterized protein.
   
 0.999
CVT24_001990
Uncharacterized protein.
   
 0.999
CVT24_000017
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.997
CVT24_012083
RIO domain-containing protein.
   
 0.997
CVT24_006513
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.997
CVT24_011700
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
  0.997
CVT24_002016
TPR_REGION domain-containing protein.
    
  0.996
CVT24_011514
KH domain-containing protein.
   
 0.995
CVT24_006172
NUC173 domain-containing protein.
   
 
 0.994
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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