STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT24_006742Uncharacterized protein. (837 aa)    
Predicted Functional Partners:
CVT24_005683
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
   
 0.999
CVT24_005137
VWFA domain-containing protein.
    
 0.999
CVT24_008189
Helicase ATP-binding domain-containing protein.
   
 0.999
CVT24_005254
BSD domain-containing protein.
   
 0.999
CVT24_005250
Uncharacterized protein.
    
 0.999
CVT24_001460
Uncharacterized protein.
    
 0.997
CVT24_009388
RING-type domain-containing protein.
    
 0.996
CVT24_000784
HTH TFE/IIEalpha-type domain-containing protein.
   
 0.996
CVT24_003675
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
    
 0.995
CVT24_011537
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.987
Your Current Organism:
Panaeolus cyanescens
NCBI taxonomy Id: 181874
Other names: Copelandia cyanescens, P. cyanescens
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