STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL81418.11-acyl-sn-glycerol-3-phosphate acyltransferase. (338 aa)    
Predicted Functional Partners:
GalE_1
UDP-glucose 4-epimerase.
  
 0.971
SFN62616.1
Polyketide cyclase / dehydrase and lipid transport.
 
     0.763
SFL53443.1
Arsenite efflux ATP-binding protein ArsA.
  
     0.723
Tgs3
Diacylglycerol O-acyltransferase; Belongs to the long-chain O-acyltransferase family.
  
 
 0.717
SinR
Helix-turn-helix.
  
     0.703
SFL53473.1
Arsenite efflux ATP-binding protein ArsA.
  
     0.696
Tgs1
Diacylglycerol O-acyltransferase; Belongs to the long-chain O-acyltransferase family.
  
 
 0.582
SFM52257.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
 
 0.580
UbiB_2
Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family.
  
     0.556
BpoA2_1
Pimeloyl-ACP methyl ester carboxylesterase.
  
 
 0.536
Your Current Organism:
Nocardia asteroides
NCBI taxonomy Id: 1824
Other names: ATCC 19247, Actinomyces asteroides, Actinomyces eppinger, Actinomyces eppingeri, Asteroides asteroides, CCM 2754, CCUG 10073, CIP 104503, Cladothrix asteroides, DSM 43373, DSM 43757, Discomyces asteroides, IFO 15531, IMET 7547, JCM 3384, N. asteroides, NBRC 15531, NCTC 11293, NRRL B-3828, Oospora asteroides, Proactinomyces asteroides, Streptothrix eppingerii, Streptotrix asteroides
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