STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lepil_0055Unannotated protein; Belongs to the FPP/GGPP synthase family. (326 aa)    
Predicted Functional Partners:
Lepil_1377
Unannotated protein; Belongs to the FPP/GGPP synthase family.
 
  
  0.929
Lepil_0141
Unannotated protein; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.916
Lepil_1619
Unannotated protein; Belongs to the UbiA prenyltransferase family.
 
 
 0.833
Lepil_0056
Unannotated protein.
       0.815
Lepil_0057
Unannotated protein.
       0.773
Lepil_0054
Unannotated protein.
       0.773
Lepil_0053
Unannotated protein; Belongs to the membrane-bound acyltransferase family.
       0.773
Lepil_3342
Unannotated protein.
  
 
 0.718
Lepil_0058
Unannotated protein.
       0.704
Lepil_0059
Unannotated protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
   
   0.703
Your Current Organism:
Leptonema illini
NCBI taxonomy Id: 183
Other names: DSM 21528, L. illini, Leptospira illini, NCTC 11301, strain 3055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.