STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBC00406.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)    
Predicted Functional Partners:
OBC00407.1
4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OBC00404.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.993
OBC00405.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.993
pyrD
Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.989
OBC00403.1
Peptidase M52; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.975
OBC11964.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.910
OBC10117.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.909
OBC06761.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.897
carA
Carbamoyl phosphate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarA family.
  
 
 0.886
pyrF
Orotidine 5'-phosphate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
 
 0.853
Your Current Organism:
Mycobacterium sp. 85201350091SCH5140682
NCBI taxonomy Id: 1834109
Other names: M. sp. 852013-50091_SCH5140682, Mycobacterium sp. 852013-50091_SCH5140682
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.