STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANU52570.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (556 aa)    
Predicted Functional Partners:
ANU55074.1
NADH-quinone oxidoreductase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.985
ANU52571.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.970
ANU52569.1
Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.961
ANU55959.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.767
ANU52638.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.742
ANU55073.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.735
ANU55071.1
NADH-quinone oxidoreductase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.562
ANU55075.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.540
A4V00_18265
AraC family transcriptional regulator; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.480
ANU53310.1
Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.469
Your Current Organism:
Hungateiclostridiaceae bacterium KB18
NCBI taxonomy Id: 1834198
Other names: H. bacterium KB18, Ruminiclostridium sp. KB18
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