STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900128475_00123Unannotated protein. (179 aa)    
Predicted Functional Partners:
GCA_900128475_00124
Unannotated protein.
 
 
 0.981
GCA_900128475_01480
Unannotated protein.
 
 
 0.950
GCA_900128475_00300
Unannotated protein.
  
 
 0.937
GCA_900128475_02645
Unannotated protein.
    
 0.931
GCA_900128475_00374
Unannotated protein.
  
 0.913
GCA_900128475_00402
Unannotated protein.
  
 
 0.849
GCA_900128475_00056
Unannotated protein.
    
 0.837
GCA_900128475_01277
Unannotated protein.
     
 0.825
GCA_900128475_01218
Unannotated protein.
 
  
  0.819
GCA_900128475_01185
Unannotated protein.
   
 0.814
Your Current Organism:
Mediterranea massiliensis
NCBI taxonomy Id: 1841865
Other names: CSUR P2645, DSM 103034, M. massiliensis, Mogibacterium sp. Marseille-P2645, strain Marseille-P2645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.