STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900128475_02006Unannotated protein. (411 aa)    
Predicted Functional Partners:
GCA_900128475_02005
Unannotated protein.
  
    0.776
GCA_900128475_02004
Unannotated protein.
       0.773
GCA_900128475_01019
Unannotated protein.
 
  
 0.716
GCA_900128475_01694
Unannotated protein.
    
 
 0.641
GCA_900128475_03047
Unannotated protein.
    
 
 0.641
GCA_900128475_03283
Unannotated protein.
    
 
 0.641
GCA_900128475_00366
Unannotated protein.
  
     0.638
GCA_900128475_03224
Unannotated protein.
   
   0.634
GCA_900128475_02018
Unannotated protein.
  
     0.595
GCA_900128475_01018
Unannotated protein.
  
  
 0.583
Your Current Organism:
Mediterranea massiliensis
NCBI taxonomy Id: 1841865
Other names: CSUR P2645, DSM 103034, M. massiliensis, Mogibacterium sp. Marseille-P2645, strain Marseille-P2645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.