STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900128475_02827Unannotated protein. (327 aa)    
Predicted Functional Partners:
GCA_900128475_02826
Unannotated protein.
       0.795
GCA_900128475_00300
Unannotated protein.
  
 
 0.736
GCA_900128475_01089
Unannotated protein.
    
 0.687
GCA_900128475_02645
Unannotated protein.
  
 
 0.663
GCA_900128475_01878
Unannotated protein.
  
 
 0.640
GCA_900128475_01993
Unannotated protein.
    
 0.616
GCA_900128475_00402
Unannotated protein.
  
 0.603
GCA_900128475_00269
Unannotated protein.
  
 
 0.589
GCA_900128475_00925
Unannotated protein.
    
 0.580
GCA_900128475_01388
Unannotated protein.
    
 0.580
Your Current Organism:
Mediterranea massiliensis
NCBI taxonomy Id: 1841865
Other names: CSUR P2645, DSM 103034, M. massiliensis, Mogibacterium sp. Marseille-P2645, strain Marseille-P2645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.