STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900128475_03223Unannotated protein. (163 aa)    
Predicted Functional Partners:
GCA_900128475_03398
Unannotated protein.
  
 0.962
GCA_900128475_02290
Unannotated protein.
  
 
  0.852
GCA_900128475_03222
Unannotated protein.
  
    0.795
GCA_900128475_03221
Unannotated protein.
       0.661
GCA_900128475_02844
Unannotated protein.
   
 
  0.605
GCA_900128475_03220
Unannotated protein.
       0.525
GCA_900128475_00300
Unannotated protein.
  
    0.437
GCA_900128475_03219
Unannotated protein.
       0.434
GCA_900128475_01459
Unannotated protein.
   
 
  0.423
GCA_900128475_01845
Unannotated protein.
  
 
  0.423
Your Current Organism:
Mediterranea massiliensis
NCBI taxonomy Id: 1841865
Other names: CSUR P2645, DSM 103034, M. massiliensis, Mogibacterium sp. Marseille-P2645, strain Marseille-P2645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.