STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900128475_03351Unannotated protein. (486 aa)    
Predicted Functional Partners:
GCA_900128475_03350
Unannotated protein.
     0.995
GCA_900128475_03349
Unannotated protein.
     0.994
GCA_900128475_03348
Unannotated protein.
 
     0.930
GCA_900128475_03353
Unannotated protein.
 
     0.925
GCA_900128475_03352
Unannotated protein.
 
     0.859
GCA_900128475_03347
Unannotated protein.
 
     0.724
GCA_900128475_00283
Unannotated protein.
  
     0.713
GCA_900128475_03354
Unannotated protein.
       0.675
GCA_900128475_01208
Unannotated protein.
  
  
 0.563
GCA_900128475_03355
Unannotated protein.
       0.561
Your Current Organism:
Mediterranea massiliensis
NCBI taxonomy Id: 1841865
Other names: CSUR P2645, DSM 103034, M. massiliensis, Mogibacterium sp. Marseille-P2645, strain Marseille-P2645
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