STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900104615_00963Unannotated protein. (246 aa)    
Predicted Functional Partners:
GCA_900104615_00846
Unannotated protein.
  
 0.997
GCA_900104615_01852
Unannotated protein.
 0.980
GCA_900104615_01503
Unannotated protein.
 0.962
GCA_900104615_02139
Unannotated protein.
 0.954
GCA_900104615_01030
Unannotated protein.
 
  0.942
GCA_900104615_00868
Unannotated protein.
 0.913
GCA_900104615_00773
Unannotated protein.
 0.907
GCA_900104615_00658
Unannotated protein.
  0.903
GCA_900104615_00980
Unannotated protein.
  0.901
GCA_900104615_01842
Unannotated protein.
 0.875
Your Current Organism:
Phocea massiliensis
NCBI taxonomy Id: 1841867
Other names: Anaerotruncus sp. Marseille-P2769, CSUR P2769, DSM 103073, P. massiliensis, strain Marseille-P2769
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.