STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOG08990.1[E] COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (371 aa)    
Predicted Functional Partners:
AOG12068.1
[E] COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
AOG11241.1
ABC transporter family protein; [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.996
AOG11960.1
ABC transporter family protein; [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.995
AOG10277.1
[E] COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
  
  0.985
AOG08787.1
[E] COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 0.984
AOG08323.1
[E] COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 0.984
AOG09031.1
ABC transporter family protein; [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.982
AOG08268.1
ABC transporter family protein; [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.981
AOG10349.1
ABC transporter family protein; [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.978
AOG10365.1
ABC transporter family protein; [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.967
Your Current Organism:
Agrobacterium sp. RAC06
NCBI taxonomy Id: 1842536
Other names: A. sp. RAC06
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