STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltD[ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases. (481 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase [NADPH] large chain; [E] COG0069 Glutamate synthase domain 2.
 0.999
glnA
glnA: glutamine synthetase, type I; [E] COG0174 Glutamine synthetase.
  
 
 0.986
carB
CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit; [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); Belongs to the CarB family.
  
 
 0.964
carA
CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit; [EF] COG0505 Carbamoylphosphate synthase small subunit; Belongs to the CarA family.
    
 0.959
BSY17_635
Bacterial NAD-glutamate dehydrogenase family protein; [E] COG2902 NAD-specific glutamate dehydrogenase.
     
 0.954
glsA
Gln_ase: glutaminase A; [E] COG2066 Glutaminase; Belongs to the glutaminase family.
     
 0.948
AOF97509.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.939
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
  
 
 0.935
glmS
Glutamine-fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.917
BSY17_784
Aminotransferase class I and II family protein; [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase.
  
 
 0.911
Your Current Organism:
Sphingobium sp. RAC03
NCBI taxonomy Id: 1843368
Other names: S. sp. RAC03
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.