STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODM26880.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (658 aa)    
Predicted Functional Partners:
ODM26904.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.947
dnaG
Deoxyguanosinetriphosphate triphosphohydrolase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
    
 0.812
ODM26473.1
Topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.809
A7W90_16125
DEAD/DEAH box helicase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.809
ODM27165.1
Nucleoside triphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.807
ODM27310.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
    
  0.807
ODM26923.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.769
ODM26918.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.761
ODM26882.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.759
ODM26874.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.664
Your Current Organism:
Clostridium sp. Bciso3
NCBI taxonomy Id: 1848158
Other names: C. sp. Bc-iso-3, Clostridium sp. Bc-iso-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.