STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BP6252_07588Uncharacterized protein. (885 aa)    
Predicted Functional Partners:
BP6252_05537
Uncharacterized protein.
    
 0.804
BP6252_04107
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.717
BP6252_04358
CDC73_C domain-containing protein.
    
 0.681
BP6252_03017
TPR-like protein.
    
 0.678
BP6252_06073
DOC domain-containing protein.
    
 0.676
BP6252_06193
Uncharacterized protein.
    
 0.676
BP6252_02163
Uncharacterized protein.
    
 0.675
BP6252_02546
Putative APC1-subunit of anaphase-promoting complex.
    
 0.674
BP6252_05452
ANAPC5 domain-containing protein.
    
 0.670
BP6252_03692
Uncharacterized protein.
    
 0.664
Your Current Organism:
Coleophoma cylindrospora
NCBI taxonomy Id: 1849047
Other names: C. cylindrospora, Coleophoma sp. CBS 449.70, Macrophoma cylindrospora, Phoma cylindrospora, Sphaeropsis cylindrospora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.