STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BP6252_07761Putative MOT1-transcriptional accessory protein. (1889 aa)    
Predicted Functional Partners:
BP6252_09795
TATA-box binding protein.
    
 
 0.988
BP6252_12735
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.919
BP6252_11666
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.907
BP6252_12564
PHD-type domain-containing protein.
   
 
 0.689
BP6252_04162
Uncharacterized protein.
    
 
 0.675
BP6252_07089
Uncharacterized protein.
   
  
 0.658
BP6252_12399
Chromatin-remodeling complex ATPase.
  
 
0.653
BP6252_02302
Uncharacterized protein.
   
   0.641
BP6252_08661
Uncharacterized protein.
  
 
0.621
BP6252_08389
Uncharacterized protein.
   
 
 0.617
Your Current Organism:
Coleophoma cylindrospora
NCBI taxonomy Id: 1849047
Other names: C. cylindrospora, Coleophoma sp. CBS 449.70, Macrophoma cylindrospora, Phoma cylindrospora, Sphaeropsis cylindrospora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.