STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GL50803_12150Alanine aminotransferase, putative. (521 aa)    
Predicted Functional Partners:
GL50803_91056
Aspartate aminotransferase.
  
 0.990
GL50803_16363
Alanine aminotransferase, putative.
  
  
0.918
GL50803_11043
Fructose-bisphosphate aldolase.
  
  
 0.755
GL50803_3331
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 
 0.685
GL50803_16934
Tetratricopeptide repeat protein.
  
  
 0.683
GL50803_94582
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
  
 0.677
GL50803_10623
Phosphoenolpyruvate carboxykinase.
  
  
 0.647
GL50803_17143
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.637
GL50803_86681
Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.615
GL50803_6492
GP-PDE domain-containing protein.
  
 
 0.597
Your Current Organism:
Giardia lamblia ATCC 50803
NCBI taxonomy Id: 184922
Other names: G. lamblia ATCC 50803, Giardia intestinalis ATCC 50803
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