STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ72131.1Fibronectin type III domain protein. (2879 aa)    
Predicted Functional Partners:
AQQ70433.1
Thermophilic serine proteinase precursor; Belongs to the peptidase S8 family.
  
 
 0.711
AQQ70286.1
Hypothetical protein.
  
     0.662
AQQ71915.1
Tetratricopeptide repeat protein.
 
    0.656
AQQ70688.1
Outer membrane biogenesis protein BamB.
  
     0.643
AQQ69920.1
Hypothetical protein.
  
     0.631
crtF
Demethylspheroidene O-methyltransferase.
 
     0.597
pilQ_3
Type IV pilus biogenesis and competence protein PilQ precursor; Belongs to the bacterial secretin family.
 
    0.578
AQQ72408.1
Peptidylprolyl isomerase.
  
     0.577
AQQ72228.1
Hypothetical protein.
  
     0.572
AQQ70858.1
Hypothetical protein.
  
     0.552
Your Current Organism:
Limihaloglobus sulfuriphilus
NCBI taxonomy Id: 1851148
Other names: DSM 100118, JCM 31927, KCTC 15601, L. sulfuriphilus, Limihaloglobus sulfuriphilus Pradel et al., Phycisphaerae bacterium SM-Chi-D1, strain SM-Chi-D1
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