STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001678845_02072Unannotated protein. (422 aa)    
Predicted Functional Partners:
GCA_001678845_02071
Unannotated protein.
       0.692
GCA_001678845_02416
Unannotated protein.
  
  
 0.620
GCA_001678845_01422
Unannotated protein.
 
  
 0.575
GCA_001678845_01803
Unannotated protein.
 
  
 0.574
GCA_001678845_01009
Unannotated protein.
  
     0.506
GCA_001678845_01423
Unannotated protein.
  
     0.500
GCA_001678845_02069
Unannotated protein.
       0.462
GCA_001678845_02070
Unannotated protein.
       0.462
GCA_001678845_02829
Unannotated protein.
   
 
 0.458
GCA_001678845_02118
Unannotated protein.
 
   
 0.411
Your Current Organism:
Christensenella sp. AF7305CM02
NCBI taxonomy Id: 1851429
Other names: C. sp. AF73-05CM02, Christensenella sp. AF73-05CM02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.