STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900104585_00032Unannotated protein. (996 aa)    
Predicted Functional Partners:
GCA_900104585_00035
Unannotated protein.
 
 
 0.985
GCA_900104585_00033
Unannotated protein.
 
  
 0.974
GCA_900104585_00034
Unannotated protein.
 
     0.950
GCA_900104585_02093
Unannotated protein.
 
 
 0.854
GCA_900104585_01927
Unannotated protein.
 
 
 0.776
GCA_900104585_02398
Unannotated protein.
 
 
 0.765
GCA_900104585_00036
Unannotated protein.
       0.618
GCA_900104585_01929
Unannotated protein.
  
  
 0.547
GCA_900104585_00247
Unannotated protein.
  
    0.530
GCA_900104585_00031
Unannotated protein.
       0.413
Your Current Organism:
Bacteroides ihuae
NCBI taxonomy Id: 1852362
Other names: B. ihuae, Bacteroides sp. Marseille-P2824, CCUG 70550, CSUR P2824, strain Marseille-P2824
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.