STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900106785_01707Unannotated protein. (115 aa)    
Predicted Functional Partners:
GCA_900106785_00205
Unannotated protein.
    
 0.624
GCA_900106785_00024
Unannotated protein.
  
 
 0.585
GCA_900106785_01319
Unannotated protein.
   
 0.562
GCA_900106785_00981
Unannotated protein.
   
 0.528
GCA_900106785_02057
Unannotated protein.
  
 
 0.507
GCA_900106785_01591
Unannotated protein.
   
 
 0.502
GCA_900106785_02871
Unannotated protein.
  
 
 0.500
GCA_900106785_00762
Unannotated protein.
  
 
 0.499
GCA_900106785_01118
Unannotated protein.
   
 
  0.491
GCA_900106785_01717
Unannotated protein.
   
 
  0.491
Your Current Organism:
Prevotellamassilia timonensis
NCBI taxonomy Id: 1852370
Other names: CSUR P2831, P. timonensis, Prevotellaceae bacterium Marseille-P2831, strain Marseille-P2831
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.