STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900155615_00027Unannotated protein. (114 aa)    
Predicted Functional Partners:
GCA_900155615_00028
Unannotated protein.
       0.773
GCA_900155615_00162
Unannotated protein.
    
  0.681
GCA_900155615_00080
Unannotated protein.
  
 0.643
GCA_900155615_02547
Unannotated protein.
  
    0.597
GCA_900155615_00029
Unannotated protein.
  
    0.567
GCA_900155615_00105
Unannotated protein.
 
    0.465
GCA_900155615_00985
Unannotated protein.
  
  0.462
GCA_900155615_00191
Unannotated protein.
    
 
 0.430
GCA_900155615_01017
Unannotated protein.
  
    0.410
GCA_900155615_02609
Unannotated protein.
  
    0.408
Your Current Organism:
Massilimaliae massiliensis
NCBI taxonomy Id: 1852384
Other names: CSUR P2963, M. massiliensis, Massilimalia massiliensis, Ruminococcaceae bacterium Marseille-P2963, strain Marseille-P2963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.