STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900155615_00379Unannotated protein. (223 aa)    
Predicted Functional Partners:
GCA_900155615_00378
Unannotated protein.
       0.773
GCA_900155615_01338
Unannotated protein.
  
 
 0.682
GCA_900155615_00377
Unannotated protein.
       0.529
GCA_900155615_00169
Unannotated protein.
    
 0.445
GCA_900155615_02162
Unannotated protein.
    
 0.445
GCA_900155615_00556
Unannotated protein.
  
  
 0.413
GCA_900155615_00048
Unannotated protein.
  
  
 0.409
Your Current Organism:
Massilimaliae massiliensis
NCBI taxonomy Id: 1852384
Other names: CSUR P2963, M. massiliensis, Massilimalia massiliensis, Ruminococcaceae bacterium Marseille-P2963, strain Marseille-P2963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.